Soil Sample 47603 / Culture 47841 / Isolate 48897
Isolate 48897
ERW-19-23-54 University of St. Thomas
Published
ESKAPE Test
Published
Recorded Thursday, March 16, 2023
Tested against ESKAPE relative Antibiotic activity Length of incubation Media used
Staphylococcus epidermidis Not tested
Escherichia coli No
Bacillus subtilis No
Enterococcus raffinosus Not tested
Pseudomonas putida Yes 24.0 hr Potato Dextrose Agar
Mycobacterium smegmatis Not tested
Enterbacter aerogenes Not tested
Acinetobacter baylyi Not tested
Distinguishing Characteristics
Look at isolate 48889 for photo of inhibition zone. The zone of inhibition is about 1 cm. It is gram negative and rod shaped.
16S rRNA Test
Published
Recorded Thursday, March 30, 2023
Genus
Pseudomonas
FASTA sequence
TCGGGAGGAAGGGCAGTGAGCGAATACCTTACCGTTTTGACGTTACCGACAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAAGTTGAATGTGAAAGCCCCGGGCTCAACCTGGGAACTGCATCCAAAACTGGCAAGCTAGAGTACAGTAGAGGGTGGTGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGCGACCACCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGATTCCCCGCAAAGCGAAACTAAATGTCGGTATCAGTTCA
53_16sF.ab1 DOWNLOAD FILE
53_16sF.ab1.seq DOWNLOAD FILE
Distinguishing Characteristics
This sequence matched 99% with pseudomonas. 16sF primer was used, the sequence of the primer: CGGCCCAGACTCCTACGGGAGGCAG. The sequence length was 397 after trimming off 83 from the front of the sequence and 194 off the back due to messy results in chromatogram.
Associated Entries

Soil Sample 47603
Collected Thursday February 9, 2023

Published

Culture Conditions 47837
Recorded Thursday February 16, 2023

Published

Isolate 48886
Recorded Thursday March 16, 2023

Published

Culture Conditions 47847
Recorded Thursday February 16, 2023

Published

Isolate 48888
Recorded Thursday March 16, 2023

Published

Culture Conditions 47841
Recorded Thursday February 16, 2023

Published

Isolate 48897
Recorded Thursday March 16, 2023

Published

Isolate 48889
Recorded Thursday March 16, 2023

Published

Culture Conditions 48883
Recorded Thursday March 16, 2023

Published

Isolate 48898
Recorded Thursday March 16, 2023

Published

Isolate 48896
Recorded Thursday March 16, 2023

Published

Isolate 48894
Recorded Thursday March 16, 2023

Published

Isolate 48893
Recorded Thursday March 16, 2023

Published

Isolate 48892
Recorded Thursday March 16, 2023

Published